Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015899784.1_cds_XP_016449809.1_44320
CDS Infomation

[gene=LOC107774698] [db_xref=GeneID:107774698] [protein=UPF0160 protein-like] [protein_id=XP_016449809.1] [location=join(4273..4539,4660..4806,5250..5348,5611..5802,6036..6155,7336..7407,7862..8086)] [gbkey=CDS]
Sequence

ATGCTCTCTGGTTTCACCAGAACTCTACTCCAAAACCCTAAACTCTTCACCTTCAAACAT
CAAAATCCTCTCGCATTCTCTCTAGTAATGGCTACCGCTAACTCCTCTTCTTTCTCACCT
GTATCTTCCCCTTCAAACCATGTTCCCCTAAAGCGAGTAGGTACTCACAATGGTAGCTTC
CATTGTGATGAAGCTCTTGGTTGCTTCATGATTCGTCTTACAAACAAGTTTTACAATGCT
CAGATTGTCCGTACTCGCGATACCCAGGTGTTGGAAACGCTTGATGCGGTGCTTGATGTT
GGTGGGGTTTATGATCCTAGTCGAGACCGTTATGATCATCACCAAAAGGGATTTCAAGAG
GTTTTTGGACATGGTTTCACTACTAAGCTTAGCAGTGCTGGTCTTGTTTACAAGCATTTT
GGAAAGGAGATAATTGCAAAGGAGCTCCAAGTTGATGAAGAACATCCGGATGTTCATAGG
TTGTTCCTTGCCATTTACAAGAGCTTCATGGAGGCAATTGATGCAGTCGACAATGGAATC
AATCAGTACGATACAGACCAGTCACCCAGATATGTAAATAATACTCATTTGTCCTCACGA
GTTGGAAGACTAAACTTGGACTGGATTGAACCTGATCAGTCTTCTGAAAAGGAGAATGAA
GCTTTCGAACGTGCAATGGATTTAGCTGGCAGTGAGTTCTTGGATCGCGTCCGCTTTCAT
GTAAGATCTTGGTTACCAGCACGCTCAATCATCATGGAGTGCCTTGCTGCAAGACACAAG
ATTGATCCTAGTGGAGAGATTGTAGTTTTTACTACATTTTGCCCGTGGAAGCTTCATTTG
TTTGAGCTGGAAGAGGAGATGAAGATTGATCCTCCCATCAAATATGCTTTATATCAGGAT
GATAGGAGCAAAAGTTGGCGAGTGCAAGCTGTGGGTGTAGCTCCTGACAGATTTGAGAGC
AGGAAAGCCCTTCCAGCTCAGTGGCGAGGTTTAAGAGATGATGAACTCTCCAAGGAAACA
GGAATTCCTGGCTGTGTTTTTATCCACATGAGTGGGTTTATTGGAGGAAATCAAAGTTAT
GAAGGAGCACTCGCAATGGCAAAAGCTGCTTTGAAGCTCTAG

Peptide Sequence

PEP ID

XP_016449809.1
PEP Infomation

PREDICTED: UPF0160 protein-like [Nicotiana tabacum]
Sequence

MLSGFTRTLLQNPKLFTFKHQNPLAFSLVMATANSSSFSPVSSPSNHVPLKRVGTHNGSF
HCDEALGCFMIRLTNKFYNAQIVRTRDTQVLETLDAVLDVGGVYDPSRDRYDHHQKGFQE
VFGHGFTTKLSSAGLVYKHFGKEIIAKELQVDEEHPDVHRLFLAIYKSFMEAIDAVDNGI
NQYDTDQSPRYVNNTHLSSRVGRLNLDWIEPDQSSEKENEAFERAMDLAGSEFLDRVRFH
VRSWLPARSIIMECLAARHKIDPSGEIVVFTTFCPWKLHLFELEEEMKIDPPIKYALYQD
DRSKSWRVQAVGVAPDRFESRKALPAQWRGLRDDELSKETGIPGCVFIHMSGFIGGNQSY
EGALAMAKAALKL

Transcript Sequence

Gene sequence data has not been registered.